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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3993844_3995543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3993844 - 3995543

Intron Length:

1700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGGG

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

AATATCTTAAAT

Flanking Amino Acid:

DRGLVHPSLQESGKKLEENV

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

61.1

43.7

Major BPS

77.8

0.69

78.2

31.8

Major PPT

81.6

0.71

0.8

76.5

32.3

Minor 5ss

-2.5

3.5

37.8

47.1

Minor BPS

66.6

0.6

1.4

77.81

37.6

Associated Gene:

Gene:

ACAD9

Ensembl Gene ID:

ENSAPLG00000013493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038392

3977437 - 3998169

20733

ENSAPLT00000030577

3976979 - 3998169

21191

ENSAPLT00000044271

3977437 - 3998169

20733