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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4020629_4025476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4020629 - 4025476

Intron Length:

4848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTCATGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATTTCTTAAAT

Flanking Amino Acid:

PAKIDDVLTVRGVIFAKDRS

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.74

0.9

80.3

37.1

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

75.3

0.87

1.3

84.92

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039447

3996393 - 4033351

36959

ENSAPLT00000036794

3996393 - 4033351

36959

ENSAPLT00000018255

3997378 - 4106628

109251

ENSAPLT00000014490

3997432 - 4142519

145088

ENSAPLT00000046370

3997432 - 4142519

145088