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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4025559_4029089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4025559 - 4029089

Intron Length:

3531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TACTTATTAACA

Flanking Amino Acid:

SSLERDAEAVEETDWDEAGT

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

79.8

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.8

0.65

0.9

72.9

37.1

Minor 5ss

37.9

-1.4

47.1

42.6

Minor BPS

66.4

0.51

1.6

73.37

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014490

3997432 - 4142519

145088