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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4027682_4029089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4027682 - 4029089

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAC

U12 Branch Point Sequence:

TTGTCCTGATAG

Flanking Amino Acid:

SSLERDAEAVGGVKHTVLLQ

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

79.8

35.3

Major BPS

58.2

0.2

1.1

61.4

34.4

Major PPT

69.2

0.43

65.3

36.3

Minor 5ss

37.9

-1.4

47.1

42.6

Minor BPS

50.7

-0.1

1.9

61.75

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046370

3997432 - 4142519

145088

ENSAPLT00000039447

3996393 - 4033351

36959

ENSAPLT00000036794

3996393 - 4033351

36959

ENSAPLT00000018255

3997378 - 4106628

109251