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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4029298_4031025_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4029298 - 4031025

Intron Length:

1728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTGTTTTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCTTCTGTACT

Flanking Amino Acid:

KKLTAGLTSSTIMPWFENDQ

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

62.5

38.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

83.7

0.76

0.7

80.1

Minor 5ss

28.8

-2.4

3.1

36.6

41.6

Minor BPS

0.4

1.8

80.33

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036794

3996393 - 4033351

36959

ENSAPLT00000018255

3997378 - 4106628

109251