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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4031089_4032659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4031089 - 4032659

Intron Length:

1571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCATTGTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCTCTCTTCATT

Flanking Amino Acid:

AKLFAERDSKTAPGAQSKRH

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

66.5

0.37

1.1

62.3

42.3

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

59.5

0.38

1.7

76.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018255

3997378 - 4106628

109251

ENSAPLT00000036794

3996393 - 4033351

36959