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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4033427_4142398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4033427 - 4142398

Intron Length:

108972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGCTCT

5'SS Class:

major

3'SS Sequence:

TCTCCTTTCGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

CAGCACTGAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

63.3

43.9

Major BPS

0.3

34.1

Major PPT

79.8

0.67

0.7

76.3

25.7

Minor 5ss

44.7

-0.6

3.2

56.7

47.6

Minor BPS

46.1

-0.2

1.7

58.39

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046370

3997432 - 4142519

145088

ENSAPLT00000014490

3997432 - 4142519

145088