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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4145004_4145915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4145004 - 4145915

Intron Length:

912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTATAAATT

Flanking Amino Acid:

AGSNIVQLLIGNKSDLSDLR

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.5

0.89

0.7

81.7

35.4

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

49.8

0.06

1.9

69.07

42.3

Associated Gene:

Gene:

RAB43

Ensembl Gene ID:

ENSAPLG00000026304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039464

4134447 - 4147169

12723

ENSAPLT00000035526

4140903 - 4146399

5497