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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4170408_4171279_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4170408 - 4171279

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TGTATTTTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ACTTTTTGAATG

Flanking Amino Acid:

PGVRELFEKEPLPPPRKTRA

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.3

74.1

38.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

73.6

0.53

1.1

71.6

Minor 5ss

-1.6

2.7

37.8

40.1

Minor BPS

55.4

0.03

1.5

57.56

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014747

4165374 - 4176024

10651

ENSAPLT00000023673

4165374 - 4175928

10555