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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4171398_4172078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4171398 - 4172078

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

GTTTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AACTGTTTATTT

Flanking Amino Acid:

IRELGGPDYARIGPKMLDHE

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.4

36.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.4

0.84

0.8

84.8

35.4

Minor 5ss

35.9

-1.6

3.2

51.5

44.9

Minor BPS

47.5

-0.1

1.9

62.67

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023673

4165374 - 4175928

10555

ENSAPLT00000014747

4165374 - 4176024

10651