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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4270064_4270956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4270064 - 4270956

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

CCATCATTCACT

Flanking Amino Acid:

VFLPNKQRTVVNVRNGMTLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

69.9

0.5

31.5

Major PPT

73.6

0.53

0.9

67.2

Minor 5ss

-1.4

47.2

42.5

Minor BPS

51.5

0.13

2.1

69.67

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027276

4218729 - 4295829

77101

ENSAPLT00000026011

4259638 - 4296851

37214

ENSAPLT00000020603

4218083 - 4295829

77747

ENSAPLT00000046390

4259638 - 4296863

37226

ENSAPLT00000015068

4228062 - 4295829

67768

ENSAPLT00000041205

4259638 - 4296863

37226