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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4276010_4277513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4276010 - 4277513

Intron Length:

1504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATACTG

5'SS Class:

major

3'SS Sequence:

TGTGTTGGCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTTCTTTTATC

Flanking Amino Acid:

TMPVDSRIIENNSLNASPSS

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.3

42.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

61.4

0.26

1.1

45.8

Minor 5ss

35.6

-1.6

3.2

47.5

Minor BPS

66.6

0.51

1.6

75.02

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041205

4259638 - 4296863

37226

ENSAPLT00000026011

4259638 - 4296851

37214

ENSAPLT00000020603

4218083 - 4295829

77747