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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4279425_4279517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4279425 - 4279517

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATATTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGGTTCATAACT

Flanking Amino Acid:

EDAIRSHSESASPSALSGSP

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.6

0.6

1.1

80.7

35.6

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

66.8

0.6

1.6

81.44

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026011

4259638 - 4296851

37214

ENSAPLT00000020603

4218083 - 4295829

77747

ENSAPLT00000046390

4259638 - 4296863

37226

ENSAPLT00000015068

4228062 - 4295829

67768

ENSAPLT00000041205

4259638 - 4296863

37226

ENSAPLT00000027276

4218729 - 4295829

77101