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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4280327_4285581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4280327 - 4285581

Intron Length:

5255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

AATGTGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATAATT

Flanking Amino Acid:

FGTVYKGKWHGDVAVKILKV

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.6

0.55

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

62.1

0.46

1.8

85.83

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026011

4259638 - 4296851

37214

ENSAPLT00000020603

4218083 - 4295829

77747

ENSAPLT00000046390

4259638 - 4296863

37226

ENSAPLT00000015068

4228062 - 4295829

67768

ENSAPLT00000041205

4259638 - 4296863

37226

ENSAPLT00000027276

4218729 - 4295829

77101