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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4286898_4288221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4286898 - 4288221

Intron Length:

1324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

AATATGTCACTT

Flanking Amino Acid:

DIARQTAQGMDYLHAKNIIH

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.5

43.8

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

91.7

0.94

0.6

88.8

20.4

Minor 5ss

-2.2

2.6

36.5

Minor BPS

39.4

-0.7

2.2

55.91

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026011

4259638 - 4296851

37214

ENSAPLT00000020603

4218083 - 4295829

77747

ENSAPLT00000046390

4259638 - 4296863

37226

ENSAPLT00000015068

4228062 - 4295829

67768

ENSAPLT00000041205

4259638 - 4296863

37226

ENSAPLT00000027276

4218729 - 4295829

77101