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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4288269_4289652_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4288269 - 4289652

Intron Length:

1384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AACAGCTGTTCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATTTCTTTAACA

Flanking Amino Acid:

NIIHRDMKSNNIFLHEGLTV

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.2

57.8

41.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

59.7

0.22

1.1

54.5

44.8

Minor 5ss

96.3

1.56

0.7

91.7

17.5

Minor BPS

87.6

1.18

0.8

89.77

25.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026011

4259638 - 4296851

37214

ENSAPLT00000020603

4218083 - 4295829

77747

ENSAPLT00000046390

4259638 - 4296863

37226

ENSAPLT00000015068

4228062 - 4295829

67768

ENSAPLT00000041205

4259638 - 4296863

37226

ENSAPLT00000027276

4218729 - 4295829

77101