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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4363863_4370843_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4363863 - 4370843

Intron Length:

6981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATGT

Flanking Amino Acid:

IFIAVIILSGDRPGLLNVKP

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

54.4

0.22

1.9

74.5

43.2

Associated Gene:

Gene:

PPARG

Ensembl Gene ID:

ENSAPLG00000009031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009444

4363615 - 4387726

24112