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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4371296_4375364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4371296 - 4375364

Intron Length:

4069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTTAGTTCC

5'SS Class:

major

3'SS Sequence:

CTTTTATTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCCTTTTATT

Flanking Amino Acid:

ILTGKTTDKSPFVIYDMNSL

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.2

37.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

86.5

0.82

0.7

85.4

Minor 5ss

-1.1

2.6

52.7

37.6

Minor BPS

67.9

0.65

1.6

85.32

34.8

Associated Gene:

Gene:

PPARG

Ensembl Gene ID:

ENSAPLG00000009031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009444

4363615 - 4387726

24112