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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4383800_4385557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4383800 - 4385557

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTCTTTTACA

Flanking Amino Acid:

YGVHACEGCKGFFRRTIRLK

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.8

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.9

0.58

69.4

41.2

Minor 5ss

36.1

-1.6

3.1

51.1

45.4

Minor BPS

71.5

0.67

1.6

78.96

37.6

Associated Gene:

Gene:

PPARG

Ensembl Gene ID:

ENSAPLG00000009031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009444

4363615 - 4387726

24112