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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4452970_4455582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4452970 - 4455582

Intron Length:

2613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

CCATACAAAACT

Flanking Amino Acid:

QQKPQSHPQLNKSQSLTNAF

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

60.3

0.26

65.5

Major PPT

0.9

0.7

84.9

29.9

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

45.4

-0.2

2.1

62.54

46.9

Associated Gene:

Gene:

SYN2

Ensembl Gene ID:

ENSAPLG00000009144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036431

4452486 - 4627333

174848

ENSAPLT00000022586

4452834 - 4627333

174500

ENSAPLT00000009576

4452834 - 4583611

130778

ENSAPLT00000044644

4452834 - 4627333

174500