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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4495907_4498368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4495907 - 4498368

Intron Length:

2462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCAGATG

5'SS Class:

major

3'SS Sequence:

ATGATGACTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGCTGTTTATTT

Flanking Amino Acid:

IGHAHSGMGKIKVDNHYDFQ

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

42.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

64.3

0.32

1.1

55.3

Minor 5ss

28.7

-2.4

3.4

38.8

46.5

Minor BPS

0.01

67.71

44.1

Associated Gene:

Gene:

SYN2

Ensembl Gene ID:

ENSAPLG00000009144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036431

4452486 - 4627333

174848

ENSAPLT00000022586

4452834 - 4627333

174500

ENSAPLT00000009576

4452834 - 4583611

130778