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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4498432_4542084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4498432 - 4542084

Intron Length:

43653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTGCA

5'SS Class:

major

3'SS Sequence:

TTTTCCCTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

ATTCCTCTAACA

Flanking Amino Acid:

QTFYPNHKEMLTMPTFPVVV

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

67.9

37.3

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

82.7

0.74

0.6

81.8

Minor 5ss

-2.1

3.3

38.4

41.8

Minor BPS

64.4

0.45

1.6

76.28

34.1

Associated Gene:

Gene:

SYN2

Ensembl Gene ID:

ENSAPLG00000009144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036431

4452486 - 4627333

174848

ENSAPLT00000009576

4452834 - 4583611

130778