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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4498432_4558442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4498432 - 4558442

Intron Length:

60011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

ATTCCTCTAACA

Flanking Amino Acid:

IYNFCDKPWVLTMPTFPVVV

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

82.7

0.74

0.6

81.8

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

64.4

0.45

1.6

76.28

34.1

Associated Gene:

Gene:

SYN2

Ensembl Gene ID:

ENSAPLG00000009144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022586

4452834 - 4627333

174500