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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4511924_4512007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4511924 - 4512007

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAAAG

5'SS Class:

major

3'SS Sequence:

TTGTTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAG

U12 Branch Point Sequence:

TACTTAGTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

65.7

Major BPS

59.7

0.24

1.5

57.6

41.3

Major PPT

86.6

0.82

0.8

84.6

Minor 5ss

-1.7

46.2

42.8

Minor BPS

43.5

-0.4

2.4

65.34

45.2

Associated Gene:

Gene:

TIMP4

Ensembl Gene ID:

ENSAPLG00000027938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019131

4511923 - 4537800

25878