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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4534567_4535225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4534567 - 4535225

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCATGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

LTTKNNIF*QAKF*KMVKSS

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

82.4

28.6

Major BPS

100

1.24

0.5

100

Major PPT

75.3

0.57

0.9

70.1

36.1

Minor 5ss

-1.7

3.5

49.9

46.6

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

TIMP4

Ensembl Gene ID:

ENSAPLG00000027938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047781

4511974 - 4537800

25827

ENSAPLT00000019131

4511923 - 4537800

25878