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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4616282_4621356_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4616282 - 4621356

Intron Length:

5075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTTAATTGG

5'SS Class:

weak_major

3'SS Sequence:

ACTTGTGGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGACAT

U12 Branch Point Sequence:

ATGAGTAAAACT

Flanking Amino Acid:

EQLNLFVCFIVVIKSKLHLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.2

49.8

41.4

Major BPS

0.03

1.1

58.7

38.1

Major PPT

63.2

0.3

1.1

56.6

42.9

Minor 5ss

37.9

-1.4

2.8

47.6

42.4

Minor BPS

41.2

-0.5

2.2

59.51

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017727

4616204 - 4623332

7129