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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4621484_4623312_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4621484 - 4623312

Intron Length:

1829

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCACAAATC

5'SS Class:

major

3'SS Sequence:

GATGGGCACACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACAGAT

U12 Branch Point Sequence:

ATGGGCACACAG

Flanking Amino Acid:

MCSYFFKLYNLSCFKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.2

68.2

39.2

Major BPS

49.4

-0

1.2

46.7

38.9

Major PPT

52.4

0.06

1.1

42.7

42.2

Minor 5ss

27.7

-2.6

4.2

42.8

38.7

Minor BPS

30.6

-1.6

31.86

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017727

4616204 - 4623332

7129