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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4695702_4697708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4695702 - 4697708

Intron Length:

2007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTCTTGACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

CTTTTCTTGACT

Flanking Amino Acid:

YMQIAGLSYSGDFRMIIGED

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

80.9

32.7

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

74.6

0.55

70.8

39.8

Minor 5ss

35.8

-1.6

2.6

41.2

Minor BPS

81.1

1.06

1.1

90.53

33.5

Associated Gene:

Gene:

TAMM41

Ensembl Gene ID:

ENSAPLG00000009828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041956

4686454 - 4700748

14295

ENSAPLT00000036052

4686454 - 4710214

23761

ENSAPLT00000010241

4686454 - 4710214

23761