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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4926756_4927330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4926756 - 4927330

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTCTTTATCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTTATCT

Flanking Amino Acid:

LNRFLLLTFADLKKYHFYYW

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

77.2

32.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.3

0.75

0.8

77.9

35.6

Minor 5ss

34.1

-1.8

2.9

47.9

41.8

Minor BPS

80.3

1.03

1.4

95.73

30.7

Associated Gene:

Gene:

ATG7

Ensembl Gene ID:

ENSAPLG00000010216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010703

4887022 - 4930687

43666

ENSAPLT00000034360

4832819 - 4930687

97869

ENSAPLT00000043848

4832819 - 4930687

97869

ENSAPLT00000030074

4894789 - 4930687

35899

ENSAPLT00000029541

4833871 - 4930687

96817

ENSAPLT00000039237

4899357 - 4930687

31331

ENSAPLT00000029308

4832819 - 4930417

97599

ENSAPLT00000039184

4906011 - 4930687

24677