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Intron Name: Anas_platyrhynchos_platyrhynchos_13_4945185_4950282_R

Intron Information:

Intron Rank:

153572

Intron Class:

major

Intron Phase:

Intron Coordinates:

4945185 - 4950282

Intron Length:

5098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

CTTTCTCAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

0.54

0.9

70.3

34.1

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

54.2

0.13

71.45

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047732

4944801 - 4957315

12515