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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5072533_5074648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5072533 - 5074648

Intron Length:

2116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

CTGTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TCATCCAAACAT

Flanking Amino Acid:

WSFFTPIIVAGVFIFSAVQM

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

69.2

35.6

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

82.1

0.72

0.9

76.5

37.2

Minor 5ss

-1.6

49.6

40.5

Minor BPS

43.2

-0.4

2.2

62.84

46.7

Associated Gene:

Gene:

SLC6A1

Ensembl Gene ID:

ENSAPLG00000010815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011302

5072308 - 5086515

14208