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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5076139_5076709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5076139 - 5076709

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTATATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTATTTTAACA

Flanking Amino Acid:

YLIGLSNITQGGIYVFKLFD

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.1

0.61

0.9

75.1

39.1

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

70.6

0.64

1.3

75.15

36.6

Associated Gene:

Gene:

SLC6A1

Ensembl Gene ID:

ENSAPLG00000010815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011302

5072308 - 5086515

14208