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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5078386_5080168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5078386 - 5080168

Intron Length:

1783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATACAAT

5'SS Class:

major

3'SS Sequence:

TTTCTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

ATCACATTGATA

Flanking Amino Acid:

KRPIADVAASGPGLAFLAYP

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

37.8

Major BPS

76.2

0.65

39.8

Major PPT

84.7

0.78

0.7

77.3

31.4

Minor 5ss

46.5

-0.4

2.8

65.5

45.8

Minor BPS

52.2

0.06

1.6

62.46

37.5

Associated Gene:

Gene:

SLC6A1

Ensembl Gene ID:

ENSAPLG00000010815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011302

5072308 - 5086515

14208