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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5080718_5080833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5080718 - 5080833

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGATTTTTAAAA

Flanking Amino Acid:

PNFSKLSDSEVWLDAATQIF

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.41

38.3

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

60.7

0.33

1.3

64.4

35.2

Associated Gene:

Gene:

SLC6A1

Ensembl Gene ID:

ENSAPLG00000010815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011302

5072308 - 5086515

14208