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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5082725_5083816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5082725 - 5083816

Intron Length:

1092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ATTTTGTAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TATTTTGTAACC

Flanking Amino Acid:

IYYLYNSFTTTLPWKHCENP

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

70.5

0.46

1.1

63.9

45.7

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

60.9

0.32

74.61

36.2

Associated Gene:

Gene:

SLC6A1

Ensembl Gene ID:

ENSAPLG00000010815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011302

5072308 - 5086515

14208