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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5083918_5085244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5083918 - 5085244

Intron Length:

1327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTCTT

5'SS Class:

major

3'SS Sequence:

CTTTTATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

GVWKLAPMFKGVGLAAAVLS

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

74.8

41.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

88.9

0.87

0.7

81.1

35.5

Minor 5ss

39.2

-1.2

3.3

59.3

45.1

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

SLC6A1

Ensembl Gene ID:

ENSAPLG00000010815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011302

5072308 - 5086515

14208