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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5274971_5294755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5274971 - 5294755

Intron Length:

19785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTTTTCTAATG

Flanking Amino Acid:

IWKGTKSTGKVVYVTATFPY

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

75.7

36.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.4

0.62

0.9

73.3

37.2

Minor 5ss

38.9

-1.2

3.6

54.8

49.4

Minor BPS

57.9

0.11

1.7

65.66

36.6

Associated Gene:

Gene:

SLC6A11

Ensembl Gene ID:

ENSAPLG00000006803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007081

5225996 - 5315781

89786