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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5310457_5311972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5310457 - 5311972

Intron Length:

1516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TGTTCTTTTACA

Flanking Amino Acid:

WATCGHEWNTENCVEFQKLN

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

89.1

0.88

0.7

83.7

31.3

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

71.8

0.68

1.6

80.12

35.4

Associated Gene:

Gene:

SLC6A11

Ensembl Gene ID:

ENSAPLG00000006803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007081

5225996 - 5315781

89786