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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5312409_5315550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5312409 - 5315550

Intron Length:

3142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTCATTATAACC

Flanking Amino Acid:

SHIFATRMEEVLSSSHMWFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

77.9

0.69

78.3

31.3

Major PPT

79.2

0.66

0.9

73.9

36.8

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

55.4

0.15

1.6

67.25

38.5

Associated Gene:

Gene:

SLC6A11

Ensembl Gene ID:

ENSAPLG00000006803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007081

5225996 - 5315781

89786