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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5396879_5398409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5396879 - 5398409

Intron Length:

1531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGATTGGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TTCTTCCTGATT

Flanking Amino Acid:

FRGLNRIQTQEEYCLLAFLS

Intron Amino Acid Position:

1154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

26.2

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

65.2

0.34

58.7

42.8

Minor 5ss

45.6

-0.5

2.5

57.6

47.1

Minor BPS

60.5

0.41

1.6

79.01

37.6

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032091

5396178 - 5657283

261106