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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5460052_5461829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5460052 - 5461829

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCATTATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTGTTCTGCATT

Flanking Amino Acid:

DGNMENSQNKAKQQDGAAAM

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

75.1

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

68.5

0.42

0.9

67.4

38.1

Minor 5ss

48.5

-0.1

2.8

43.2

Minor BPS

53.5

0.19

1.9

75.93

41.4

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035824

5382264 - 5694443

312180

ENSAPLT00000039499

5391119 - 5694443

303325

ENSAPLT00000032091

5396178 - 5657283

261106

ENSAPLT00000037447

5386898 - 5657283

270386

ENSAPLT00000006379

5381978 - 5694443

312466

ENSAPLT00000037061

5386898 - 5694443

307546

ENSAPLT00000036681

5391119 - 5694443

303325

ENSAPLT00000048282

5391119 - 5694443

303325