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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5461872_5468311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5461872 - 5468311

Intron Length:

6440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTCAA

5'SS Class:

major

3'SS Sequence:

TTTCATCATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCATAT

Flanking Amino Acid:

TDNANASLVNGKMQDGNMEN

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

Major BPS

100

1.24

0.5

100

Major PPT

75.1

0.57

0.9

70.1

35.3

Minor 5ss

32.6

-2

3.1

37.6

42.2

Minor BPS

49.8

0.06

2.1

79.3

42.1

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006379

5381978 - 5694443

312466

ENSAPLT00000037447

5386898 - 5657283

270386

ENSAPLT00000037061

5386898 - 5694443

307546

ENSAPLT00000035824

5382264 - 5694443

312180

ENSAPLT00000048282

5391119 - 5694443

303325

ENSAPLT00000032091

5396178 - 5657283

261106

ENSAPLT00000039499

5391119 - 5694443

303325