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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5461872_5471701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5461872 - 5471701

Intron Length:

9830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCATCATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCATAT

Flanking Amino Acid:

GEEEEKKDKKGKMQDGNMEN

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

100

1.24

0.5

100

Major PPT

75.1

0.57

0.9

70.1

35.3

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

49.8

0.06

2.1

79.3

42.1

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036681

5391119 - 5694443

303325