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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5468405_5469905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468405 - 5469905

Intron Length:

1501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTAA

5'SS Class:

major

3'SS Sequence:

TATTACTCAGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTTTTTTTACCC

Flanking Amino Acid:

VKQDDGHQLPDSSHPSSHPP

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.2

37.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

68.5

0.42

0.9

64.4

37.1

Minor 5ss

-1.8

3.6

45.7

49.5

Minor BPS

65.1

0.45

1.6

74.15

36.9

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032091

5396178 - 5657283

261106

ENSAPLT00000048282

5391119 - 5694443

303325

ENSAPLT00000027810

5391119 - 5694443

303325

ENSAPLT00000037447

5386898 - 5657283

270386

ENSAPLT00000006379

5381978 - 5694443

312466

ENSAPLT00000037061

5386898 - 5694443

307546

ENSAPLT00000035824

5382264 - 5694443

312180