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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5468405_5471701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468405 - 5471701

Intron Length:

3297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

TATTACTCAGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTTTTTTTACCC

Flanking Amino Acid:

GEEEEKKDKKDSSHPSSHPP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

68.5

0.42

0.9

64.4

37.1

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

65.1

0.45

1.6

74.15

36.9

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039499

5391119 - 5694443

303325