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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5481796_5504960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5481796 - 5504960

Intron Length:

23165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

CTTTGCTTGACT

Flanking Amino Acid:

FYQPPGEGNEGCGTATGGAE

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

69.7

0.44

66.5

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

71.1

0.74

1.8

87.04

39.2

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032091

5396178 - 5657283

261106

ENSAPLT00000039499

5391119 - 5694443

303325

ENSAPLT00000027810

5391119 - 5694443

303325

ENSAPLT00000037061

5386898 - 5694443

307546

ENSAPLT00000048282

5391119 - 5694443

303325

ENSAPLT00000006379

5381978 - 5694443

312466

ENSAPLT00000036681

5391119 - 5694443

303325

ENSAPLT00000035824

5382264 - 5694443

312180

ENSAPLT00000040922

5391365 - 5657398

266034