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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5505159_5561732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5505159 - 5561732

Intron Length:

56574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATTTTTTAATT

Flanking Amino Acid:

CRHLKTSPTEGLAGTAADLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

87.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.1

0.83

0.8

35.3

Minor 5ss

-0.8

2.9

57.2

47.1

Minor BPS

75.3

0.87

82.84

Associated Gene:

Gene:

ATP2B2

Ensembl Gene ID:

ENSAPLG00000006083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035824

5382264 - 5694443

312180

ENSAPLT00000040922

5391365 - 5657398

266034

ENSAPLT00000032091

5396178 - 5657283

261106

ENSAPLT00000039499

5391119 - 5694443

303325

ENSAPLT00000027810

5391119 - 5694443

303325

ENSAPLT00000037061

5386898 - 5694443

307546

ENSAPLT00000006379

5381978 - 5694443

312466

ENSAPLT00000036681

5391119 - 5694443

303325

ENSAPLT00000048282

5391119 - 5694443

303325