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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5822500_5823505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5822500 - 5823505

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

AACTCTTTATCT

Flanking Amino Acid:

NLQLVNAKPQECQKGTMGTL

Intron Amino Acid Position:

1165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.6

0.62

0.9

77.6

36.5

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

63.9

0.51

1.6

75.26

41.6

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286