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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5835179_5835448_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5835179 - 5835448

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTAC

5'SS Class:

weak_major

3'SS Sequence:

TATGAATCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TCTTCTATGAAT

Flanking Amino Acid:

AQFEAHSDAQVLVLLDVTPD

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

35.7

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

63.7

0.31

0.9

59.8

41.2

Minor 5ss

57.5

0.25

69.7

41.2

Minor BPS

56.8

0.29

1.7

77.01

39.6

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286