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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5848213_5848616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5848213 - 5848616

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTCTAATC

Flanking Amino Acid:

YVRMNRRRLKGENGTEDCIR

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

27.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

61.8

0.27

58.7

41.4

Minor 5ss

46.4

-0.4

2.5

62.6

42.2

Minor BPS

59.3

0.27

1.6

69.97

36.1

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286